Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX202912: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-105785' containing sample 'Facklamia hominis ACS-120-V-SCH10' from individual 'Facklamia hominis ACS-120-V'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.8M spots, 575.4M bases, 337.3Mb downloads

UUID: 1e1944e6-494f-48ef-8172-536006fc0877

Design: 3-5 kb jumping library

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA52113 • SRP000104 • All experiments • All runs

Sample: Generic sample from Facklamia hominis ACS-120-V-Sch10

SAMN01801644 • SRS374186 • All experiments • All runs

Organism: Facklamia hominis ACS-120-V-Sch10

Library:

Name: Solexa-105785

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 9 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 149767.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:2DYK2

material_type: DNA:DNA Somatic

project: G15620

root_sample_id: SM-26ZYD

sample_id: SM-2DYK2

work_request: 30151

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2012-08-11 16:32:22.0	GAPipeline	RTA1.13.48	Sequencer Application 1.5.15.1

Runs: 2 runs, 2.8M spots, 575.4M bases, 337.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR641952	1,449,615	292.8M	172.1Mb	2012-12-28
SRR642293	1,399,078	282.6M	165.2Mb	2012-12-29

ID:: 270256

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